Chris,
If you could collect and examine data similar to that shown on the following website, it might go a long way toward verifying the correct behavior of your controllers. If you aren’t interested in all the details, you could skip to the end of the website page to the additional observations and conclusions to decide if the information might apply to your situation. Note also that the abnormalities shown in some of the data have been eliminated by an update from Tracy.
http://www.rotarycopilot.com/start-up-sequence/
Also, if you really want to examine the settings of the B controller and have an EM2/3, Ed’s EFISM, or the controller monitoring setup shown elsewhere on the above website, you could move the B controller chip to the A position on the circuit board. Its parameters would then be accessible. The procedure for removing the chips for updates is given in the instruction manuals that Tracy provides. You would have to decide if it is worth the time and effort to do this.
Steve